Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916112.1_cds_XP_016465805.1_58724
CDS Infomation

[gene=LOC107788629] [db_xref=GeneID:107788629] [protein=ninja-family protein AFP3-like] [protein_id=XP_016465805.1] [location=join(13675..14305,16273..16661)] [gbkey=CDS]
Sequence

ATGGCGGAAACTGAAGAAAATAGGGGAAAGAGGAGTCTTTCAATGCAAATGAATGGTTTT
TCAAGAGATCTGTTGCATAAATTCATGAACGGAAACAACTTTAAAGGGAAATTGCAACAA
ATTCCTCCGAATGAGAATCATGAGGATGAAGATGATATAGAGCTGAGCTTGGGGCTTTCA
TTAAACGGCCGATTTGGTGTGGACCCAGAAAGAGCTAAAAGACTCAAACGTTCTTCTTCA
ATCAATAACGTTGTGTTCATTAACGGTGAGGACAGTAATAATAGCCGTGGATTTCCTTTT
GGCTCGTACGCAACTCTAGCAAGGACGTGTTCGTTACCCGTTGAAACAGAGGAGGAGTGC
AGAAAACGGAAGGAAATACAATCGCTGAGGCGTTTGGAGGCAAAGAGGAAGAGATGGGAG
AAATTACAGAATGTCAGAGTGGTGAAAGATTCGGTTGATTTGGAGGAGAATCGCGAAGAA
AATGGCAATGGTTATAGTAATGGTCAGGGTTCAGTTGGAAATATTATTTATGTTAATAAT
GAGAATTCGTTGCCCTTGTCACAAGGGTCGATGGGTTCACAGGGCAGTGGTTCTTCAGGA
ATTTCTGATTTAGGGAGTCAACCCATTCAAGGGCCAAGTGACTGTACCGGGACGAATATT
CCCGCTAGCATTAAGTCTGCAGAGCAAGAGCACGAACAGGAACCGGTAGCTGCACAACCC
GAAACTACAAGCGAAAAAGCACCTAGCATATGTAATGGAAATGCTAGCAAGGAAACAAAA
GAAATGATCAAAAACTTCATGTTAAACATGCCTTGTGTCTCGACAAAAGGTGACGGACCA
AACGGCAAGAAGATTGAAGGATTCTTATACAGATATAAAAAGGGAGAAGAAGTGCGGATA
GTTTGTGTTTGTCATGGTAACTTCCTCTCCCCAGCCGAGTTTGTCAAGCACGCTGGTGGC
AGTGATGTTGCAAACCCGTTGAGGCATATTGTTGTCAATCCTGCGCCGCTAATGGGATGA

Peptide Sequence

PEP ID

XP_016465805.1
PEP Infomation

PREDICTED: ninja-family protein AFP3-like [Nicotiana tabacum]
Sequence

MAETEENRGKRSLSMQMNGFSRDLLHKFMNGNNFKGKLQQIPPNENHEDEDDIELSLGLS
LNGRFGVDPERAKRLKRSSSINNVVFINGEDSNNSRGFPFGSYATLARTCSLPVETEEEC
RKRKEIQSLRRLEAKRKRWEKLQNVRVVKDSVDLEENREENGNGYSNGQGSVGNIIYVNN
ENSLPLSQGSMGSQGSGSSGISDLGSQPIQGPSDCTGTNIPASIKSAEQEHEQEPVAAQP
ETTSEKAPSICNGNASKETKEMIKNFMLNMPCVSTKGDGPNGKKIEGFLYRYKKGEEVRI
VCVCHGNFLSPAEFVKHAGGSDVANPLRHIVVNPAPLMG

Transcript Sequence

Gene sequence data has not been registered.